PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03152.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 1025aa    MW: 108339 Da    PI: 9.1768
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03152.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.6e-11888933555
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  Zpz_sc03152.1.g00010.1.am.mk 888 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 933
                                   99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-16881943IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.87E-11881937No hitNo description
PROSITE profilePS5088817.282883932IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-15885942IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-9888933IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-13889938IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1025 aa     Download sequence    Send to blast
MGVEWLLPLP PTPSPPSPPP ISTSGVAGAR GVPENSNSQS CVRGRAGGGG AEAGALPLPP  60
PPRMAAASSS SAAAAATIRA HLARTGSGAD CQASPRSLLS RILLRGGDGG SSGGVFGCRV  120
RLPRRYGSGG SKDGGASEQG DTPRVKVVER APPDMPIETP RSSLGAGRRK PEEELVSMNL  180
GLGASLVLLL SKSAVELNKM VELRAQMEAL VAEIRHAAQR KMEEKQAAPA MARASYSHQE  240
SNGSSATTTV VKDPIVFPAA DADAASNCSR TTDTALSARG GGGGGVVVDP MEAELQAELN  300
RMQRRTVHGP NAPVQGLELR LPKVKTKGNA VRDSPSRSCV DDGDEPEDDA GEDDAESDEE  360
RCEDKSPPHG GVSARALERR LHELLQKRQQ ERIVELEAAL DAAQRRVHEK EREAARWRDA  420
AKLVSHRRDE SRRTVVRWRE RARAQVAGSG AKKTGSQWHV PFVHPSAACQ FHWGRHAAQV  480
TRFKCCPLLG LRARLCTLAL VQTQEVSARA PVWRQQKRQG IQWRWCHENT TRQAPGPFHP  540
AVPPAGPLHE YGTHGKPIKR YYAVDSAPFL CASRGPPPSR SHYYLQLCKR NVSQLMRTAD  600
FFAPASQPAS PPLVHSSFLS VMGDREFGTG SSCAFLSPLF FDYVGRSVAD RRAELSRRIP  660
PRHQAVSSPA QQTQSSIAMQ PSGHELAGGD GGGGAQADDF FDQMLSTLPS AWADLGGKSP  720
WELSAGAEEG HSAQAPFGDE SGLLASRLQQ HQIGGDKSSS PVMLQLSDLH RNNGLPGGAG  780
EDGGFSPLAL FTDRSAPARE EMEGGFKSPN ASGGDHAVFN GFGMHGAAAA VQQQFGQQGG  840
SVSPQSLGGP AASSGGAPTG ATSSAGGGAA PPRQQRVRAR RGQATDPHSI AERLRRERIA  900
ERMKSLQELV PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAGM APLVASMSSE  960
GNSNGSSISN KGNSPATNGG TGTGENGGGL RVTEHRVAKM MEEDMGTAMQ YLQGKGLCLM  1020
PISLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1892897RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9714339e-80EU971433.1 Zea mays clone 364652 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141937118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-40LJRHL1-like 2